BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D12LP1|AL425696
(812 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig647 1233 0.0
3x_Contig1508 234 2e-61
>3x_Contig647
Length = 1778
Score = 1233 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Plus
Query: 191 caacggacatccataaggaatccacacggcatcttctggacggtgactacatttggtaac 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 caacggacatccataaggaatccacacggcatcttctggacggtgactacatttggtaac 77
Query: 251 tagttccaacacaagaaataaggatccgggaaaaccgtaactatgcaaacttgtcagcga 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tagttccaacacaagaaataaggatccgggaaaaccgtaactatgcaaacttgtcagcga 137
Query: 311 acggtatctagcactgacccattgctcgacattgttatgtgcaacggaagtgcaaagttg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 acggtatctagcactgacccattgctcgacattgttatgtgcaacggaagtgcaaagttg 197
Query: 371 atcatgtcagcatttaaaaaattctctttctgtttgcagtaactagcctttggcagcatc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atcatgtcagcatttaaaaaattctctttctgtttgcagtaactagcctttggcagcatc 257
Query: 431 attgtttccttctaaagtttaagaggaccccaaaggaaataagaaggaaaattcgaagga 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attgtttccttctaaagtttaagaggaccccaaaggaaataagaaggaaaattcgaagga 317
Query: 491 aaattccgtcgcttacgtttcgtagaaataaagtgaatggcggaacgaagtacaacacca 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaattccgtcgcttacgtttcgtagaaataaagtgaatggcggaacgaagtacaacacca 377
Query: 551 ttttgggaattgccacagtccgacacagaagttttcgtggtgttaaaatccgcatcagtt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttttgggaattgccacagtccgacacagaagttttcgtggtgttaaaatccgcatcagtt 437
Query: 611 ctttttctttttcttcgtttggttttgattcctaaagattgacttttccattgggaatat 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctttttctttttcttcgtttggttttgattcctaaagattgacttttccattgggaatat 497
Query: 671 cctgcgccccgtttgtcggaaccgtacacctgaaataggcaagcggaaaaaaagtatact 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cctgcgccccgtttgtcggaaccgtacacctgaaataggcaagcggaaaaaaagtatact 557
Query: 731 agtggggaatgtataattggagaagtagggaggaaaaagatcacatttgcgatcgggttt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agtggggaatgtataattggagaagtagggaggaaaaagatcacatttgcgatcgggttt 617
Query: 791 gctggatgttctgctgctgaag 812
||||||||||||||||||||||
Sbjct: 618 gctggatgttctgctgctgaag 639
>3x_Contig1508
Length = 7899
Score = 234 bits (118), Expect = 2e-61
Identities = 124/126 (98%)
Strand = Plus / Minus
Query: 1 atcaattgcctcttatatcggccggtgactaagaaaacaaatctttatccaaatcatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atcaattgcctcttatatcggccggtgactaagaaaacaaatctttatccaaatcatttg 83
Query: 61 tcacttgttgttaccggttcgaatggacaaaattctttcaaaatccatctctccaaacaa 120
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 82 tcacttgttgttaccggttcgaatggacaaaagtctgtcaaaatccatctctccaaacaa 23
Query: 121 tgaatg 126
||||||
Sbjct: 22 tgaatg 17
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6894
Number of Sequences: 1807
Number of extensions: 6894
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 2
length of query: 812
length of database: 10,358,551
effective HSP length: 16
effective length of query: 796
effective length of database: 10,329,639
effective search space: 8222392644
effective search space used: 8222392644
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)